f|*.i
Defined in file: brainvisa/types/builtin.py
1 - Mask from SPMt
2 - Primal Sketch from SPMt
2D Parcellation to 3D parcellation
5 - Compute Grey white Interface Mesh
AC/PC Or Normalization
AddScannerBasedReferential
Aims Converter
Ana Brain Mask from T1 MRI
Ana Compute Hemi Grey White Classification
Ana Get Opened Hemi Surface
Ana Get Spherical Cortical Surface
Ana Split Brain from Brain Mask
Anat To FreeSurfer Meshes Transformation
Anatomist Fusion 3D/mesh
Anatomist Show 3D Activations
Anatomist Show 3D Fusion
Anatomist Show a lot of Twins
Anatomist Show Bias Correction
Anatomist Show Brain Mask on T1 MRI
Anatomist Show Bundles
Anatomist show Commissure coordinates
Anatomist Show Diffusion RGB
Anatomist Show Elevation Map
anatomist Show fMRI-MRI Fusion
Anatomist Show Fold Graph
Anatomist Show Graph
Anatomist Show Grey White on T1 MRI
Anatomist Show GreyWhite Snake on T1 MRI
Anatomist Show Hemisphere With MRI
Anatomist Show Nucleus Graph
Anatomist Show Rainbow Volume
Anatomist Show Registration
Anatomist Show ROI
Anatomist Show Split Brain on T1 MRI
Anatomist Show Twins
Anatomist Show Volume
Anatomist Show White Matter With MRI
Anatomist Show White Ridge on T1 MRI
Anatomy Normalization (using AimsMIRegister)
Apply Transformation
Baladin Normalization to AIMS converter
Brain Mask from T2
Brain Mask Segmentation
Brain volumes
BrainVISA Show Histo analysis
Change Template Referential
Cingular Pole Projection
Classifier MLP
Classifier SVM
Classifier tests
Compare Grey Segmentations
Compute Brain Mask
Compute Cortex image
Compute Cortical Fold Graph Upgrade From Old
Conversion of meshes to aims referential
Conversion of native (unresampled) meshes to aims referential
Convert image from Spm to nii (using SPM8)
Copy data between databases
Copy Referential
coregister (using SPM8)
Correction Brain Mask from T1 MRI
Cortical Fold Arg (3.0)
Cortical Fold Graph (3.1+)
Cortical Fold Graph (general)
Cortical Fold Graph (one hemisphere)
Cortical Fold Graph 2007-2011 (general)
Cortical Fold Graph Upgrade Structure
Create a 4D volume from a list of 3D Volumes
Create an Average Volume from a 4D-Volume
Create an Average Volume from Different Volumes
Create Cortical Constraints Texture
Create FreeSurfer Meshes referential
Create Left Hemisphere Cortical Constraints Texture
Create points ROI
Create Right Hemisphere Cortical Constraints Texture
Create Sulcus Label Volume
Create Surface-Based Functional Data (Projection of fMRI Data onto the Cortical Surface)
Creation of Kernels for fMRI data projection
CSF + Grey Mask editor
CSF Classif
Diffusion Bundles Analysis
Diffusion Bundles Transformation
Diffusion Maps
Diffusion model
Diffusion model pipeline
Diffusion QBall
Diffusion tensor
Diffusion to AC/PC referential
Diffusion to Extended AC/PC referential
Diffusoids
Echoplanar Distortion Correction
Edit histo analysis
Fascicles Tracking Pipeline
Fiber Tracking
Fix normalized image referential
Folds graph over-segmentation
FSL Distortion Correction
FSL Normalization to AIMS converter
FSL to AIMS transformation converter
Fusion Linear Contrastes
GeneralImport
Generic Diffusion Importation
Get FreeSurfer Cerebellum in split mask
Get Hemi Surface
Get Spherical Brain Hull
Get Spherical Hemi Surface
Graph Structure (3.0)
Graph Structure (3.1)
Graph To Volume Converter
Grey White Classification 2012
Grey white Interface
Grey White Surface 2012
Gyral Parcellation
Head Mesh
Hemisphere Cortical Folds Graph
Hemisphere Grey White Classification
Hemisphere Grey White Mesh
Hemisphere Grey White Topological Correction
Hemisphere Pial Mesh
Hemisphere Sulci Skeleton
Hemisphere Sulci Thickness and Volumes
Hemisphere Sulci Voronoi
Histogram analysis
Histogram analysis
Import Brain Mask
Import Diffusion NmrDwSpinEchoEpi
Import Diffusion NmrSmsVB13ADwSpinEchoEpi (sequence NeuroSpin)
Import Diffusion Philips
Import From FreeSurfer to T1 pipeline
Import MNI CIVET Segmentation
Import SPMt for structural analysis
Import T1 MRI
ImportData
Insular Pole Projection
Label volume editor
Left Cingular Pole Projection
Linear Combination
Localize Talairach Coordinate
Morphologist 2011
Morphologist 2012
Morphologist 2013
Morphologist 2013, parallel version
Morphomaths
Morphomaths basic
New Referential
Normalization pipeline
Normalize to MNI space (using SPM8)
Prepare Subject for Anatomical Pipeline
Projection using Convolution Kernels
Read and complete AC-PC files
Reorient Anatomy
Resample ROI graph
Resample to Template Space
Resampling
Reset internal image transformation
Right Cingular Pole Projection
Right Insular Pole Projection
Rigid registration with mutual information
ROI drawing
segment/normalize (using SPM New Segmentation - no links between parameters)
segment/normalize (using SPM segmentation - no links between parameters)
segment/normalize (using VBM toolboxe - no links between parameters)
segment/normalize (using VBM toolboxe)
Segmentation of Corpus Callosum
Simplified Morphologist 2013
Single file to volume series
Skull-stripped brain normalization
Skull-stripping
Split Brain Mask
Split Brain Mask
SPM to AIMS transformation converter
Sulcal Lines Extraction
Sulcal Lines Extraction Left
Sulcal Lines Extraction Right
Sulci Distance to Lesion
Sulcus Parameterization
Surfacic Sulci To Labels Volume
T1 Bias Correction
T1 Bias Correction
T1 Pipeline 2007
Talairach Transformation
Talairach Transformation From Normalization
Test Classifier
Test Classifier 3
Threshold
Threshold and Normalize
Train classifier
Train MLP
Train SVM
Transform a commissures AC-PC coordinates
uncompress any disk item
Validation Pipeline
Validation_0 Commissure Coordinates
Validation_1 Bias Correction from T1 MRI
Validation_2 Nobias Histo analysis
Validation_3 Brain Mask from T1 MRI
Validation_4 Split Brain from Brain Mask
view images in a titled grid
View in hippocampic referential
Vip Bias Correction
Vip Get Brain
Vip Histogram analysis
Vip Split Brain
Volume series to single file
Volume To ROI Graph Converter
Volumic Average
Volumic Deviation
Volumic Sulcus SPAM
Volumic T Test
White matter mask
White Mesh Depth Map
White Mesh without decimation
2D Image
3D Volume
4D Volume
AC/PC DW Diffusion MR
AC/PC T2 Diffusion MR
anatomical Template
Any Type
Apparent Diffusion Coefficient
Bottom Volume
Bounding Box Points
Brain Mask
Cingular Pole Template
Cingular Pole Template Subject
Corpus Callosum mask
Corrected DW Diffusion MR
Cortex Catchment Bassins
Cortex Skeleton
CSF+GREY Mask
Curves graph
Dartel Template
Diffusion Density Map
Diffusion Mask
Diffusion Standard Deviation
Diffusion Weighted T2
DW Diffusion MR
Elevation map
Error mask
Extended AC/PC DW Diffusion MR
Extended AC/PC T2 Diffusion MR
fMRI
fMRI activations
Fractional Anisotropy
Freesurfer aseg
FreesurferAnat
Functional mask
Grey White Mask
Grey White Mid-Interface Volume
Gyri White Volume
Head Mask
Hemispheres Template
Hull Junction Volume
JacobianDeterminant
Label volume
Left Cingular Pole Template Subject
Left Cortex Catchment Bassins
Left Cortex Skeleton
Left CSF Mask
Left CSF+GREY Mask
Left Grey White Mask
Left Gyri Volume
Lesion distance map
Lesion Mask
Morphologist Grey White Mask
Nu FreesurferAnat
Parallel Diffusion Coefficient
Projection convolution kernels
Rainbow 3D volume
Raw DW Diffusion MR
Raw T1 MRI
Raw T2 Diffusion MR
RawFreesurferAnat
RGB Eigenvector
Ribbon Freesurfer
Right Cingular Pole Template Subject
Right Cortex Catchment Bassins
Right Cortex Skeleton
Right CSF Mask
Right CSF+GREY Mask
Right Grey White Mask
Right Gyri Volume
ROI
Simple Surface Volume
Split Brain Mask
SPMt map
Sulci Volume
Sulci Voronoi
T1 Brain Mask
T1 FreesurferAnat
T1 MRI
T1 MRI AC/PC oriented
T1 MRI Bias Corrected
T1 MRI Bias Field
T1 MRI Edges
T1 MRI Filtered For Histo
T1 MRI Mean Curvature
T1 MRI Variance
T1 MRI White Matter Ridges
T2 Brain Mask
T2 Diffusion MR
T2 White matter Mask
Tracking regions
Tracking regions graph
Transverse Diffusion Coefficient
Volume Ratio